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ACCESSION EXPERIMENT TITLE
GSE1121 changes of global gene expression in E. coli during an oxygen shift

EXPERIMENTS
EXPNAME SAMPLES TIMEPOINT CHANNELS TEST COL TEST BKGD CNTL COL CNTL BKGD LOG NORM USE RMA DATA TYPE
Anaerobic WT / Aerobic WTGSM18286,GSM18287,GSM18288,GSM18289/GSM18261,GSM18262,GSM182631(rma)NoYesYesmbplot
appY Aerobic / WT AerobicGSM18235,GSM18236,GSM18237/GSM18261,GSM18262,GSM182631(rma)NoYesYesmbplot
oxyR Aerobic / WT AerobicGSM18255,GSM18256,GSM18257/GSM18261,GSM18262,GSM182631(rma)NoYesYesmbplot
fnr Aerobic / WT AerobicGSM18252,GSM18253,GSM18254/GSM18261,GSM18262,GSM182631(rma)NoYesYesmbplot
arcA fnr Aerobic / WT AerobicGSM18249,GSM18250,GSM18251/GSM18261,GSM18262,GSM182631(rma)NoYesYesmbplot
appY Anaerobic / WT AnaerobicGSM18264,GSM18265,GSM18266/GSM18286,GSM18287,GSM18288,GSM182891(rma)NoYesYesmbplot
oxyR Anaerobic / WT AnaerobicGSM18280,GSM18281,GSM18282/GSM18286,GSM18287,GSM18288,GSM182891(rma)NoYesYesmbplot
soxS Anaerobic / WT AnaerobicGSM18283,GSM18284,GSM18285/GSM18286,GSM18287,GSM18288,GSM182891(rma)NoYesYesmbplot
arcA Anaerobic / WT AnaerobicGSM18271,GSM18272,GSM18273/GSM18286,GSM18287,GSM18288,GSM182891(rma)NoYesYesmbplot
fnr Anaerobic / WT AnaerobicGSM18277,GSM18278,GSM18279/GSM18286,GSM18287,GSM18288,GSM182891(rma)NoYesYesmbplot
arcA fnr Anaerobic / WT AnaerobicGSM18274,GSM18275,GSM18276/GSM18286,GSM18287,GSM18288,GSM182891(rma)NoYesYesmbplot
soxS Aerobic / WT AerobicGSM18258,GSM18259,GSM18260/GSM18261,GSM18262,GSM182631(rma)NoYesYesmbplot
arcA Aerobic / WT AerobicGSM18246,GSM18247,GSM18248/GSM18261,GSM18262,GSM182631(rma)NoYesYesmbplot
Recs: 13
SAMPLES
ID PLATFORM SAMPLE NAME ID PLATFORM SAMPLE NAME ID PLATFORM SAMPLE NAME
GSM18235 GPL199 aerobic_appY_rep1 GSM18258 GPL199 aerobic_soxS_rep1 GSM18277 GPL199 anaerobic_fnr_rep1
GSM18236 GPL199 aerobic_appY_rep2 GSM18259 GPL199 aerobic_soxS_rep2 GSM18278 GPL199 anaerobic_fnr_rep2
GSM18237 GPL199 aerobic_appY_rep3 GSM18260 GPL199 aerobic_soxS_rep3 GSM18279 GPL199 anaerobic_fnr_rep3
GSM18246 GPL199 aerobic_arcA_rep1 GSM18261 GPL199 aerobic_wild_rep1 GSM18280 GPL199 anaerobic_oxyR_rep1
GSM18247 GPL199 aerobic_arcA_rep2 GSM18262 GPL199 aerobic_wild_rep2 GSM18281 GPL199 anaerobic_oxyR_rep2
GSM18248 GPL199 aerobic_arcA_rep3 GSM18263 GPL199 aerobic_wild_rep3 GSM18282 GPL199 anaerobic_oxyR_rep3
GSM18249 GPL199 aerobic_arcAfnr_rep1 GSM18264 GPL199 anaerobic_appY_rep1 GSM18283 GPL199 anaerobic_soxS_rep1
GSM18250 GPL199 aerobic_arcAfnr_rep2 GSM18265 GPL199 anaerobic_appY_rep2 GSM18284 GPL199 anaerobic_soxS_rep2
GSM18251 GPL199 aerobic_arcAfnr_rep3 GSM18266 GPL199 anaerobic_appY_rep3 GSM18285 GPL199 anaerobic_soxS_rep3
GSM18252 GPL199 aerobic_fnr_rep1 GSM18271 GPL199 anaerobic_arcA_rep1 GSM18286 GPL199 anaerobic_wild_rep1
GSM18253 GPL199 aerobic_fnr_rep2 GSM18272 GPL199 anaerobic_arcA_rep2 GSM18287 GPL199 anaerobic_wild_rep2
GSM18254 GPL199 aerobic_fnr_rep3 GSM18273 GPL199 anaerobic_arcA_rep3 GSM18288 GPL199 anaerobic_wild_rep3
GSM18255 GPL199 aerobic_oxyR_rep1 GSM18274 GPL199 anaerobic_arcAfnr_rep1 GSM18289 GPL199 anaerobic_wild_rep4
GSM18256 GPL199 aerobic_oxyR_rep2 GSM18275 GPL199 anaerobic_arcAfnr_rep2
GSM18257 GPL199 aerobic_oxyR_rep3 GSM18276 GPL199 anaerobic_arcAfnr_rep3
Recs: 43
  1.9992 secs
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OU Bioinformatics Core Facility @ Advanced Center for Genome Technology | updated:22 Jan 2009